Systems Biology Software

  • CellDesigner 4.0.1 (including plugin SBMLsqueezer 1.1)
  • COPASI 4.4.29
  • semanticSBML 1.0.8
  • Xppaut 5.98
  • TiDE
  • Cytoscape 2.6.2 (including plugin BiNoM)
  • SBMLeditor
  • SBML2LaTeX
  • OpenAlea
  • libSBML 3.3.2
  • R 2.8
  • Taverna 2.1 beta 2
  • ISA-Tools: ISAcreator …
  • SBGN: EPE Edinburgh Pathway Editor SBGN
  • SBGN: Arcadia

Systems Biology Models

  • BioModels Database
  • Yeast consensus model version 2.0

Convenience Tools

  • gtk-recordMyDesktop
  • XML Copy Editor 1.2.0.2

Python

  • epydoc
  • NumArray
  • NumPy
  • Python 2.5, IPython
  • PyX
  • Soappy
  • SciPy
 
software_included0.3.5.txt · Zuletzt geändert: 2009/11/13 11:30 von claubeck
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