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Nächste Überarbeitung 		Vorhergehende Überarbeitung
link_collection [2010/03/02 17:08]
216.133.246.143 WnykPqmyFtYLlN 		link_collection [2010/05/07 10:18]
wolfliebermeister
Zeile 1: Zeile 1:
-W2m5Mo  <a href="http://cswfmoafroye.com/">cswfmoafroye</a>, [url=http://mnkbcbuuhhvh.com/]mnkbcbuuhhvh[/url], [link=http://gzthwenhnjkr.com/]gzthwenhnjkr[/link], http://xqpsceoawhld.com/+====== Link collection ====== 
 + 
 +**The collected links will be included as browser bookmarks in future versions of SB.OS.** 
 + 
 + 
 +===== General ===== 
 + 
 +Systems Biology Graphical Notation (SBGN) Templates (use this to standardize your graphical network models) 
 +http://sbgn.org/Documents/Templates 
 + 
 +Wikipedia 
 +http://www.wikipedia.org/ 
 + 
 +Social Network: myExperiment makes it easy to find, use and share scientific workflows and other Research Objects 
 +http://www.myexperiment.org/ 
 + 
 +OpenHelix On-demand, multimedia, narrated tutorials on a large number of the most popular and powerful free web-based bioinformatics tools. You get the web tutorial, PowerPoint slides, handouts, and exercises. 
 +http://openhelix.com/ 
 + 
 +Minimum Information Checklists for Biologial Data: MIBBI Minimum Information for Biological and Biomedical Investigations 
 +http://mibbi.sourceforge.net/ 
 + 
 +Insert your title and/or abstract and get suggestion in which journal you should publish 
 +http://www.biosemantics.org/jane/ 
 + 
 +Open source SOPs  
 +http://openwetware.org/ 
 + 
 +Links to Bioinformatics/Systems Biology tools and resources 
 +http://www.bioinfowiki.mpg.de/ 
 + 
 +===== Literature ===== 
 + 
 +Systems Biology - A Textbook 
 +http://eu.wiley.com/WileyCDA/WileyTitle/productCd-3527318747.html 
 + 
 + 
 +===== SBML infrastructure and model databases ===== 
 + 
 +SBML 
 +www.sbml.org 
 + 
 +MIRIAM resources 
 +http://www.ebi.ac.uk/miriam/ 
 + 
 +BioModels Database 
 +http://www.ebi.ac.uk/biomodels-main/ 
 + 
 +JWS model database 
 +http://jjj.biochem.sun.ac.za/database/ 
 + 
 +===== Software ===== 
 + 
 +E-cell 
 +http://www.e-cell.org/ecell/ 
 + 
 +Zotero is a free, easy-to-use Firefox extension to help you collect, manage, and cite your research sources. It lives right where you do your work—in the web browser itself. 
 +http://www.zotero.org/ 
 + 
 +Ubuntu Science Software 
 +https://help.ubuntu.com/community/UbuntuScience 
 + 
 +===== Databases ===== 
 + 
 +Pathguide contains information about 299 biological pathway resources (hinting SBML/BioPAX/CellML export capability ) 
 +http://www.pathguide.org/ 
 + 
 +Sacharomyces Genome Database 
 +http://www.yeastgenome.org/ 
 + 
 +Thermodynamics of Enzyme-Catalyzed Reactions 
 +http://xpdb.nist.gov/enzyme_thermodynamics/ 
 + 
 +EMBL Nucleotide Sequence Database 
 +http://www.ebi.ac.uk/embl 
 + 
 +Fly View - Drosophila development and genetics 
 +http://pbio07.uni-muenster.de/ 
 + 
 +GenBank - all known nucleotide and protein sequences 
 +http://www.ncbi.nlm.nih.gov/Genbank/GenbankOverview.html 
 + 
 +Kyoto Encyclopedia of Genes and Genomes (KEGG) 
 +http://www.genome.ad.jp/kegg 
 + 
 +PDB - Structure data determined by X-ray crystallography and NMR 
 +http://www.rcsb.org/pdb 
 + 
 +WikiPathways In the new tradition of Wikipedia, WikiPathways is an open, public platform dedicated to the curation of biological pathways by and for the scientific community. 
 +http://www.wikipathways.org/ 
 + 
 +Reactome - a curated knowledgebase of biological pathways 
 +http://www.reactome.org/ 
 + 
 +BioCyc is a collection of 507 Pathway/Genome Databases. 
 +http://biocyc.org/ 
 + 
 +Ontology Lookup Service 
 +http://www.ebi.ac.uk/ontology-lookup/ 
 + 
 +BioCatalogue: providing a curated catalogue of Life Science Web Services. 
 +http://www.biocatalogue.org/ 
 + 
 +LaTeX Bibliography Styles Database 
 +http://bst.maururu.net/ 
 + 
 +The Database of Useful Biological Numbers 
 +http://bionumbers.hms.harvard.edu/ 
 + 
 +===== Groups ===== 
 + 
 +Innovationskolleg Theoretische Biologie (ITB) - Hanspeter Herzel, Peter Hammerstein, Andreas Herz 
 +http://itb.biologie.hu-berlin.de/ 
 + 
 +Theoretical Biochemistry, Charité - Hermann-Georg Holzhütter 
 +http://www.charite.de/ 
 + 
 +Göteborg Yeast Centre - Stefan Hohmann 
 +http://www.gmm.gu.se/gyc/index.html 
 + 
 +Metabolic Control Analysis Research Group - David Fell 
 +http://bms-mudshark.brookes.ac.uk/ 
 + 
 +Molecular Cell Physiology - Hans Westerhoff 
 +http://www.bio.vu.nl/vakgroepen/mcp/ 
 + 
 +Computational Physiology Hamiliton Institute - Wilhelm Huisinga 
 +http://www.hamilton.ie/compphysiol/ 
 + 
 +Institut für Biologie, Humboldt-Universität 
 +http://www.biologie.hu-berlin.de/ 
 + 
 +Zentrum für BioPhysik und BioInformatik der Humboldt-Universität (BPI) 
 +http://www.biologie.hu-berlin.de/%7EBPI/ 
 + 
 +Humboldt University Research Initiative "Systems Biology" 
 +http://bioinf.charite.de/biophys/systemsbiology/ 
 + 
 +SFB 555 Complex Nonlinear Processes 
 +http://sfb555.physik.hu-berlin.de/ 
 + 
 +SFB 618 Theoretical Biology: Robustness, Modularity and Evolutionary Design of Living Systems 
 +http://www.biologie.hu-berlin.de/forschung/SFB_618/ 
 + 
 +Graduate program - Dynamics and evolution of cellular and macromolecular processes 
 +http://www.biologie.hu-berlin.de/gk 
 + 
 +BioCentrum Amsterdam 
 +http://www.science.uva.nl/biocentrum/ 
 + 
 +Bioinformatics Graduate Program Boston University 
 +http://www.bu.edu/bioinformatics 
 + 
 +Kyoto Bioinformatics Center 
 +http://www.bic.kyoto-u.ac.jp/ 
 
link_collection.txt · Zuletzt geändert: 2010/05/07 10:18 von wolfliebermeister
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